Basic Information
Locus ID:
Oco09G014620
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG09 | 20225725 | 20228957 | - | Oco09G014620 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.06 | 111,965.21 Da | 38.44 | 98.89 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 705 | 990 | 1.09491E-89 | - |
| Pfam | PF00560 | Leucine Rich Repeat | 508 | 529 | 1.0 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 703 | 989 | 2.9E-41 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 69 | 3.7E-6 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 221 | 280 | 2.9E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 294 | 353 | 4.5E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 148 | 206 | 1.0E-8 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 293 | 498 | 1.49E-32 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 103 | 595 | 1.1E-63 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 696 | 991 | 1.64E-71 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 682 | 783 | 5.9E-18 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 367 | 620 | 3.8E-62 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 186 | 6.6E-40 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 288 | 366 | 2.5E-18 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 784 | 1011 | 7.6E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 187 | 287 | 3.0E-28 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 505 | 529 | 16.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 699 | 991 | 2.8E-28 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 243 | 267 | 57.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 170 | 193 | 35.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 293 | 315 | 380.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 553 | 576 | 31.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 340 | 364 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 194 | 218 | 170.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 699 | 997 | 35.905319 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 705 | 733 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 842 | 854 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 508 | 521 | 5.6E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 553 | 566 | 5.6E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1019 | 1044 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_052155287.1 | receptor-like protein kinase HSL1 [Oryza glaberrima] | 0 |
| O49545 | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 OS=Arabidopsis thaliana OX=3702 GN=BAM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6G1ERM5 | Protein kinase domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_031503 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology