Basic Information
Locus ID:
Oco09G013910
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Extension to Ser/Thr-type protein kinases
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG09 | 19593336 | 19601207 | + | Oco09G013910 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.42 | 64,043.42 Da | 45.31 | 69.75 | -0.74 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05599 | STKc_NDR_like | 114 | 485 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 117 | 269 | 1.1E-43 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 318 | 421 | 1.3E-21 | IPR000719 |
| Pfam | PF00433 | Protein kinase C terminal domain | 440 | 484 | 3.0E-5 | IPR017892 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 90 | 473 | 9.17E-90 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 107 | 201 | 2.2E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 202 | 438 | 2.8E-72 | - |
| SMART | SM00220 | serkin_6 | 116 | 421 | 4.7E-106 | IPR000719 |
| SMART | SM00133 | pkinase_C_6 | 422 | 486 | 1.4E-5 | IPR000961 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 116 | 421 | 47.91922 | IPR000719 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 422 | 494 | 13.82826 | IPR000961 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 122 | 145 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 235 | 247 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 504 | 554 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 47 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G14350.1 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein. | 0 |
| RefSeq | XP_052157254.1 | uncharacterized protein LOC127774998 [Oryza glaberrima] | 0 |
| Q9NBK5 | Serine/threonine-protein kinase tricornered OS=Drosophila melanogaster OX=7227 GN=trc PE=1 SV=1 | 0 | |
| TrEMBL | A0A6G1EM21 | Serine/threonine-protein kinase tricorner-like OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_015967 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology