Basic Information
Locus ID:
Oco09G012410
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG09 | 18211047 | 18216511 | + | Oco09G012410 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.69 | 21,190.17 Da | 56.43 | 94.79 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 83 | 1.8E-10 | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G06840.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_006654550.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 [Oryza brachyantha] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | J3M876 | Protein kinase domain-containing protein OS=Oryza brachyantha OX=4533 GN=102701821 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 3 | jg16731, jg3143, jg38070 |
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg2111 |
| Arecaceae | Cocos nucifera | 1 | COCNU_04G004820 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-9471 |
| Poaceae | Oryza coarctata | 1 | Oco09G012410 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC3BG087690 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-5703 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_4640 |
| Zosteraceae | Zostera marina | 1 | Zosma02g17350.v3.1 |