Basic Information
Locus ID:
Oco09G009740
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Bulb-type mannose-specific lectin
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG09 | 15172611 | 15173372 | + | Oco09G009740 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.50 | 23,828.20 Da | 42.16 | 111.17 | 0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 4 | 129 | 5.0E-26 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 4 | 187 | 2.43E-46 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 131 | 194 | 5.0E-6 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 32 | 1.5E-8 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 33 | 130 | 1.3E-32 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 214 | 23.057514 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G19130.1 | S-locus lectin protein kinase family protein. | 0 |
| RefSeq | XP_040380302.1 | G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 [Oryza brachyantha] | 0 |
| O64477 | G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS=Arabidopsis thaliana OX=3702 GN=At2g19130 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0E0L2K7 | Receptor-like serine/threonine-protein kinase OS=Oryza punctata OX=4537 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Brassica nigra | 1 | BniB05g005740.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq02G2509 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_5AG0386500, gene-QOZ80_7BG0598240 |
| Poaceae | Oryza coarctata | 1 | Oco09G009740 |