Basic Information
Locus ID:
Oco09G008060
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
NAC domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG09 | 13233213 | 13235613 | + | Oco09G008060 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.31 | 22,937.15 Da | 39.91 | 75.55 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14415 | UBA_NACA_NACP1 | 163 | 208 | 7.18874E-18 | - |
| Pfam | PF01849 | NAC domain | 70 | 125 | 6.1E-21 | IPR002715 |
| Pfam | PF19026 | HYPK UBA domain | 169 | 208 | 3.7E-12 | IPR044034 |
| Gene3D | G3DSA:2.20.70.30 | - | 76 | 129 | 4.0E-30 | IPR038187 |
| Gene3D | G3DSA:1.10.8.10 | - | 170 | 207 | 7.6E-19 | - |
| SMART | SM01407 | NAC_2 | 70 | 126 | 1.8E-24 | IPR002715 |
| PIRSF | PIRSF015901 | NAC_alpha | 33 | 209 | 6.0E-60 | IPR016641 |
| ProSiteProfiles | PS51151 | NAC A/B domain profile. | 67 | 132 | 17.095947 | IPR002715 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 30 | 55 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 56 | 75 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 30 | 75 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12390.1 | Nascent polypeptide-associated complex (NAC), alpha subunit family protein. | 0 |
| RefSeq | XP_006654327.1 | nascent polypeptide-associated complex subunit alpha-like protein [Oryza brachyantha] | 0 |
| Q9M612 | Nascent polypeptide-associated complex subunit alpha-like protein OS=Pinus taeda OX=3352 PE=2 SV=1 | 0 | |
| TrEMBL | J3M6J5 | NAC-A/B domain-containing protein OS=Oryza brachyantha OX=4533 GN=102707311 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology