Basic Information
Locus ID:
Oco09G005510
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Hippocampus abundant transcript-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG09 | 7621071 | 7634233 | - | Oco09G005510 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.38 | 47,686.53 Da | 46.58 | 108.79 | 0.65 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17330 | MFS_SLC46_TetA_like | 12 | 433 | 6.9935E-43 | - |
| Pfam | PF07690 | Major Facilitator Superfamily | 13 | 206 | 5.1E-19 | IPR011701 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 12 | 439 | 1.7E-39 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 7 | 438 | 6.7E-38 | IPR036259 |
| ProSiteProfiles | PS50850 | Major facilitator superfamily (MFS) profile. | 8 | 441 | 11.845388 | IPR020846 |
| ProSitePatterns | PS00216 | Sugar transport proteins signature 1. | 70 | 87 | - | IPR005829 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42210.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_052155198.1 | uncharacterized protein LOC127773211 [Oryza glaberrima] | 0 |
| Q96MC6 | Hippocampus abundant transcript 1 protein OS=Homo sapiens OX=9606 GN=MFSD14A PE=1 SV=2 | 0 | |
| TrEMBL | A0A6G1ENY7 | MFS domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_023071 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology