Basic Information
Locus ID:
Oco09G005110
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
protein serine/threonine kinase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG09 | 6735380 | 6752458 | + | Oco09G005110 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.86 | 50,940.16 Da | 39.66 | 79.72 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 35 | 134 | 1.1E-15 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 276 | 367 | 3.9E-14 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 288 | 449 | 1.08E-26 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 140 | 214 | 1.0E-6 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 29 | 137 | 8.0E-21 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 266 | 451 | 7.7E-31 | - |
| SMART | SM00220 | serkin_6 | 205 | 430 | 2.0E-4 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 181 | 469 | 14.77499 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 29 | 137 | 18.063917 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 306 | 318 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55830.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_040380073.1 | putative cysteine-rich receptor-like protein kinase 20 isoform X1 [Oryza brachyantha] | 0 |
| Q9FHG4 | Probable L-type lectin-domain containing receptor kinase S.7 OS=Arabidopsis thaliana OX=3702 GN=LECRKS7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0D9WE42 | Protein kinase domain-containing protein OS=Leersia perrieri OX=77586 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 3 | BH05.601, CH01.3028, CH04.309 |
| Poaceae | Lolium multiflorum | 6 | gene-QYE76_003593, gene-QYE76_017906, gene-QYE76_019077 ... |
| Poaceae | Oryza coarctata | 1 | Oco09G005110 |
| Poaceae | Oryza sativa | 1 | LOC_Os10g10540.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_05G170900, gene-BS78_08G007300 |
| Poaceae | Puccinellia tenuiflora | 5 | Pt_Chr0106389, Pt_Chr0106422, Pt_Chr0501231, Pt_Chr0604613 ... |
| Poaceae | Sporobolus alterniflorus | 2 | Chr09G007730, Chr13G017140 |
| Poaceae | Thinopyrum elongatum | 8 | Tel1E01G497600, Tel2E01G092800, Tel2E01G1016400 ... |
| Poaceae | Triticum aestivum | 6 | TraesCS2B02G628100.1, TraesCS2B02G628200.1 ... |