Basic Information
Locus ID:
Oco09G002540
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Translocase of chloroplast 159/132, membrane anchor domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG09 | 2549065 | 2553277 | - | Oco09G002540 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.62 | 130,930.59 Da | 45.23 | 80.56 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01853 | Toc34_like | 560 | 808 | 7.18218E-130 | - |
| Pfam | PF04548 | AIG1 family | 591 | 726 | 1.7E-23 | IPR006703 |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 953 | 1217 | 3.7E-123 | IPR024283 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 588 | 726 | 9.47E-20 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 561 | 812 | 1.2E-58 | IPR027417 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 470 | 1222 | 0.0 | IPR005690 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 588 | 818 | 30.228085 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 157 | 182 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 37 | 73 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 115 | 321 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 393 | 413 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 297 | 321 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 342 | 357 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 34 | 99 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 342 | 431 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 414 | 431 | - | - |
| Coils | Coil | Coil | 261 | 281 | - | - |
| Coils | Coil | Coil | 911 | 931 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02510.1 | translocon at the outer envelope membrane of chloroplasts 159. An integral membrane GTPase that functions as a transit-sequence receptor required for the import of proteins necessary for chloroplast biogenesis. Located in the outer chloroplast membrane. Phosphorylation of the G-domains regulate translocon assembly. | 0 |
| RefSeq | XP_006655002.2 | translocase of chloroplast 101, chloroplastic [Oryza brachyantha] | 0 |
| O81283 | Translocase of chloroplast 159, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC159 PE=1 SV=1 | 0 | |
| TrEMBL | J3M421 | AIG1-type G domain-containing protein OS=Oryza brachyantha OX=4533 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology