Basic Information
Locus ID:
Oco09G002310
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Short Name:
NHX1
Description:
Sodium hydrogen exchanger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG09 | 2327641 | 2335431 | - | Oco09G002310 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.72 | 59,505.43 Da | 34.96 | 121.31 | 0.67 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 26 | 443 | 1.8E-56 | IPR006153 |
| Gene3D | G3DSA:6.10.140.1330 | - | 145 | 197 | 5.5E-15 | - |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 98 | 112 | 5.9E-12 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 113 | 121 | 5.9E-12 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 153 | 163 | 5.9E-12 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 84 | 95 | 5.9E-12 | IPR004709 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G05030.1 | sodium hydrogen exchanger 2. member of Sodium proton exchanger family | 0 |
| RefSeq | XP_052155896.1 | sodium/hydrogen exchanger 1-like [Oryza glaberrima] | 0 |
| Q9SXJ8 | Sodium/hydrogen exchanger 1 OS=Oryza sativa subsp. japonica OX=39947 GN=NHX1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6G1ELL1 | Na_H_Exchanger domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_017228 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology