Basic Information
Locus ID:
Oco09G002090
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG09 | 2139815 | 2142339 | + | Oco09G002090 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.00 | 13,007.50 Da | 45.69 | 64.05 | -0.49 |
Protein Domain:
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G03020.1 | transducin family protein / WD-40 repeat family protein. | 0 |
| RefSeq | XP_052155569.1 | LEC14B protein-like isoform X2 [Oryza glaberrima] | 0 |
| O24467 | LEC14B homolog OS=Prunus armeniaca OX=36596 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6G1ETL9 | WD_REPEATS_REGION domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_037065 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg35799 |
| Apiaceae | Apium graveolens | 1 | Ag9G01819 |
| Asteraceae | Flaveria trinervia | 1 | Ftri16G09289 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.1HG0062710.1 |
| Poaceae | Oryza coarctata | 1 | Oco09G002090 |