HalophFGD

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Basic Information
Locus ID: Oco09G001530
Species & Taxonomic ID: Oryza coarctata & 77588
Genome Assembly: GCA_030770085.1
Description: Belongs to the protein kinase superfamily
Maps and Mapping Data
Chromosome Start End Strand ID
LG09 1445876 1448386 - Oco09G001530
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.16 18,514.89 Da 60.41 70.66 -0.36
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF53300 vWA-like 75 151 2.5E-9 IPR036465
Gene3D G3DSA:3.40.50.410 von Willebrand factor, type A domain 79 166 2.4E-10 IPR036465
ProSiteProfiles PS50234 VWFA domain profile. 80 126 8.65031 IPR002035
Best hit
Source Best Hit ID Description E-value
RefSeq XP_044394358.1 uncharacterized protein LOC123117723 isoform X2 [Triticum aestivum] 0
TrEMBL A0A6G1EGM7 VWFA domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_003335 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 8 AH05.388, AH05.865, AH05.867, BH01.4317, BH01.4319, BH05.448 ...
CH05.1052, CH05.1055
Poaceae Eleusine coracana subsp. coracana 3 gene-QOZ80_9AG0670800, gene-QOZ80_9AG0675400 ...
gene-QOZ80_9BG0699310
Poaceae Lolium multiflorum 5 gene-QYE76_039716, gene-QYE76_058228, gene-QYE76_058230 ...
gene-QYE76_058235, gene-QYE76_058238
Poaceae Oryza coarctata 2 Oco09G001520, Oco09G001530
Poaceae Puccinellia tenuiflora 2 Pt_Chr0605438, Pt_Chr0605787
Poaceae Zoysia japonica 4 nbis-gene-18273, nbis-gene-53961, nbis-gene-53963 ...
nbis-gene-57879
Poaceae Zoysia macrostachya 1 Zma_g17598
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.