Basic Information
Locus ID:
Oco09G001480
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG09 | 1420439 | 1423388 | + | Oco09G001480 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.44 | 70,787.74 Da | 41.83 | 90.86 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 330 | 595 | 2.62232E-94 | - |
| Pfam | PF01657 | Salt stress response/antifungal | 42 | 126 | 6.3E-11 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 326 | 595 | 4.2E-48 | IPR001245 |
| Pfam | PF01657 | Salt stress response/antifungal | 150 | 241 | 4.1E-10 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 308 | 622 | 1.48E-81 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 284 | 399 | 2.5E-33 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 30 | 131 | 2.4E-15 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 138 | 243 | 1.6E-13 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 400 | 605 | 2.8E-60 | - |
| SMART | SM00220 | serkin_6 | 324 | 571 | 4.0E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 324 | 611 | 37.558998 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 136 | 243 | 16.208235 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 30 | 131 | 15.75563 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 445 | 457 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 330 | 352 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 610 | 650 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 603 | 650 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G70520.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 2. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_040379829.1 | cysteine-rich receptor-like protein kinase 2 [Oryza brachyantha] | 0 |
| Q9CAL3 | Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana OX=3702 GN=CRK2 PE=1 SV=1 | 0 | |
| TrEMBL | J3M3P0 | Cysteine-rich receptor-like protein kinase 2 OS=Oryza brachyantha OX=4533 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology