Basic Information
Locus ID:
Oco09G001370
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
serine threonine-protein kinase-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG09 | 1271385 | 1274011 | + | Oco09G001370 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.47 | 83,378.40 Da | 42.10 | 79.94 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 479 | 763 | 3.23166E-87 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 475 | 762 | 3.1E-41 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 452 | 762 | 1.48E-69 | IPR011009 |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 60 | 297 | 4.97E-9 | IPR009091 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 554 | 772 | 1.1E-47 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 436 | 553 | 8.5E-33 | - |
| SMART | SM00220 | serkin_6 | 473 | 766 | 2.2E-20 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 473 | 766 | 35.368229 | IPR000719 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 35 | 5.0 | - |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 479 | 511 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 606 | 618 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 775 | 802 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 779 | 802 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G55950.1 | CRINKLY4 related 3. | 0 |
| RefSeq | XP_015692462.2 | putative serine/threonine-protein kinase-like protein CCR3 [Oryza brachyantha] | 0 |
| Q9LY50 | Putative serine/threonine-protein kinase-like protein CCR3 OS=Arabidopsis thaliana OX=3702 GN=CCR3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6G1EE94 | Protein kinase domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_003299 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology