Basic Information
Locus ID:
Oco08G019470
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Phosphatidylinositol-4-phosphate 5-Kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG08 | 22458079 | 22471662 | + | Oco08G019470 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.01 | 155,942.78 Da | 46.96 | 80.09 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17300 | PIPKc_PIKfyve | 1110 | 1363 | 1.95144E-128 | IPR044769 |
| CDD | cd03334 | Fab1_TCP | 92 | 360 | 4.85501E-102 | - |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1309 | 1362 | 2.0E-9 | IPR002498 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1143 | 1307 | 4.6E-34 | IPR002498 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 95 | 349 | 5.9E-21 | IPR002423 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1090 | 1363 | 1.7E-79 | - |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 153 | 326 | 4.97E-27 | IPR027409 |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1085 | 1222 | 3.0E-31 | IPR027484 |
| Gene3D | G3DSA:3.30.810.10 | - | 1224 | 1364 | 2.8E-42 | - |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 151 | 326 | 8.2E-34 | IPR027409 |
| SMART | SM00330 | PIPK_2 | 1092 | 1364 | 2.7E-88 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1045 | 1363 | 57.750721 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 52 | 78 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 473 | 501 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 473 | 491 | - | - |
| Coils | Coil | Coil | 864 | 884 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G34260.1 | FORMS APLOID AND BINUCLEATE CELLS 1A. Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the porposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. | 0 |
| RefSeq | XP_052152694.1 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1A-like [Oryza glaberrima] | 0 |
| Q9XID0 | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D OS=Arabidopsis thaliana OX=3702 GN=FAB1D PE=3 SV=1 | 0 | |
| TrEMBL | A0A0E0KX89 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Oryza punctata OX=4537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology