Basic Information
Locus ID:
Oco08G015850
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG08 | 19407820 | 19409565 | + | Oco08G015850 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.23 | 42,662.54 Da | 40.26 | 86.28 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 52 | 173 | 1.5514E-23 | IPR002083 |
| CDD | cd18280 | BTB_POZ_BPM_plant | 201 | 311 | 8.79234E-48 | - |
| Pfam | PF00917 | MATH domain | 59 | 172 | 4.6E-7 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 203 | 312 | 2.0E-28 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 48 | 185 | 1.5E-32 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 191 | 311 | 5.5E-34 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 187 | 308 | 7.7E-39 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 48 | 180 | 3.0E-27 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 313 | 379 | 1.4E-17 | - |
| SMART | SM00061 | math_3 | 54 | 158 | 7.9E-5 | IPR002083 |
| SMART | SM00225 | BTB_4 | 212 | 314 | 7.8E-26 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 49 | 175 | 20.544359 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 212 | 275 | 18.534117 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_015633709.1 | BTB/POZ and MATH domain-containing protein 2 [Oryza sativa Japonica Group] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0P0WEY6 | Os04g0625600 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0625600 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology