Basic Information
Locus ID:
Oco08G015590
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Short Name:
FLS2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG08 | 19127247 | 19131264 | - | Oco08G015590 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.78 | 128,720.17 Da | 39.83 | 106.35 | 0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 912 | 1201 | 4.58057E-83 | - |
| Pfam | PF13855 | Leucine rich repeat | 540 | 599 | 9.0E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 371 | 431 | 1.5E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 275 | 335 | 7.5E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 908 | 1195 | 2.6E-36 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 688 | 746 | 1.0E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 56 | 104 | 9.7E-8 | IPR013210 |
| SUPERFAMILY | SSF52047 | RNI-like | 432 | 799 | 1.84E-65 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 882 | 1198 | 9.29E-65 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 112 | 432 | 6.91E-66 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 214 | 315 | 1.1E-32 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 988 | 1207 | 1.6E-48 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 316 | 415 | 5.3E-31 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 876 | 987 | 6.8E-23 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 53 | 213 | 5.1E-39 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 417 | 661 | 1.6E-73 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 662 | 835 | 3.7E-51 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 634 | 658 | 31.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 562 | 586 | 2.2 | IPR003591 |
| SMART | SM00220 | serkin_6 | 906 | 1205 | 3.1E-30 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 610 | 633 | 85.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 394 | 417 | 340.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 781 | 806 | 62.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 418 | 442 | 71.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 178 | 202 | 11.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 514 | 538 | 220.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 250 | 274 | 11.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 370 | 393 | 29.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 708 | 732 | 190.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 466 | 490 | 13.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 322 | 346 | 9.1 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 684 | 707 | 280.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 906 | 1205 | 34.817001 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1036 | 1048 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 613 | 626 | 3.2E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 634 | 647 | 3.2E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G46330.1 | Leucine-rich receptor-like protein kinase family protein. Encodes a leucine-rich repeat serine/threonine protein kinase that is expressed ubiquitously. FLS2 is involved in MAP kinase signalling relay involved in innate immunity. Essential in the perception of flagellin, a potent elicitor of the defense response. FLS2 is directed for degradation by the bacterial ubiquitin ligase AvrPtoB. | 0 |
| RefSeq | XP_040379032.1 | LRR receptor-like serine/threonine-protein kinase FLS2 [Oryza brachyantha] | 0 |
| Q0JA29 | LRR receptor-like serine/threonine-protein kinase FLS2 OS=Oryza sativa subsp. japonica OX=39947 GN=FLS2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6G1BX23 | Protein kinase domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_016856 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_545 |
| Amaranthaceae | Atriplex hortensis | 2 | Ah016577, Ah016595 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00022985 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl45319, Sgl50103 |
| Amaranthaceae | Chenopodium album | 5 | gene:ENSEOMG00000011016, gene:ENSEOMG00000033233 ... |
| Amaranthaceae | Chenopodium quinoa | 3 | CQ.Regalona.r1.8AG0008760, CQ.Regalona.r1.8BG0009090 ... |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30063970, pistato.v30070100 |
| Apiaceae | Apium graveolens | 4 | Ag6G01110, Ag6G01111, Ag7G00866, Ag7G00867 |
| Arecaceae | Cocos nucifera | 1 | COCNU_02G018210 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103697992 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_04.2277.V1.1, AsparagusV1_06.35.V1.1 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT5G46330.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10000746m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp2g11180.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB04g011060.2N, BniB04g015820.2N |
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq04G0359, Ceq04G0360 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl04G0467 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno17g04100 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate04g00180 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG12.671 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb2G14589 |
| Poaceae | Echinochloa crus-galli | 2 | BH09.2514, CH09.2744 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_4AG0303720, gene-QOZ80_4BG0334630 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0195450.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_047795 |
| Poaceae | Oryza coarctata | 2 | Oco07G016100, Oco08G015590 |
| Poaceae | Oryza sativa | 1 | LOC_Os04g52780.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_06G231100 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0105934, Pt_Chr0301209 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr25G002990, Chr30G002950 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G781400 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG065670, gene_TRIDC2BG070540 |
| Poaceae | Triticum aestivum | 3 | TraesCS2A02G461800.1, TraesCS2B02G483400.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb070510_P001 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g21974 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG03.63 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc10g05640 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_14_RagTag.873 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-16634 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-5470 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000025l.79 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-8687 |
| Salicaceae | Populus euphratica | 1 | populus_peu09863 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132622079 |
| Solanaceae | Solanum chilense | 2 | SOLCI001783100, SOLCI001783300 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107008930, gene-LOC107010815 |