HalophFGD

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Basic Information
Locus ID: Oco08G008850
Species & Taxonomic ID: Oryza coarctata & 77588
Genome Assembly: GCA_030770085.1
Description: F-box domain
Maps and Mapping Data
Chromosome Start End Strand ID
LG08 12567016 12568720 + Oco08G008850
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.35 44,079.88 Da 62.77 88.65 -0.39
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Best hit
Source Best Hit ID Description E-value
RefSeq XP_052150968.1 F-box/LRR-repeat protein At5g02910-like [Oryza glaberrima] 0
TrEMBL Q01IG9 H0805A05.7 protein OS=Oryza sativa OX=4530 GN=H0805A05.7 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 6 BH07.3820, BH07.3821, CH07.3879, CH07.3880, CH07.3882 ...
CH09.1689
Poaceae Eleusine coracana subsp. coracana 4 gene-QOZ80_2AG0151080, gene-QOZ80_4AG0313050 ...
gene-QOZ80_8AG0615000, gene-QOZ80_8AG0615050
Poaceae Hordeum vulgare 38 HORVU.MOREX.r3.1HG0025200.1, HORVU.MOREX.r3.2HG0105200.1 ...
HORVU.MOREX.r3.2HG0114700.1, HORVU.MOREX.r3.2HG0114880.1, HORVU.MOREX.r3.2HG0168360.1.CDS1, HORVU.MOREX.r3.2HG0168370.1, HORVU.MOREX.r3.4HG0334320.1, HORVU.MOREX.r3.6HG0558490.1.CDS1, HORVU.MOREX.r3.6HG0558500.1, HORVU.MOREX.r3.6HG0565400.1, HORVU.MOREX.r3.6HG0569940.1, HORVU.MOREX.r3.6HG0595870.1, HORVU.MOREX.r3.6HG0595890.1.CDS1, HORVU.MOREX.r3.6HG0597570.1, HORVU.MOREX.r3.6HG0597580.1, HORVU.MOREX.r3.6HG0617540.1, HORVU.MOREX.r3.6HG0617560.1, HORVU.MOREX.r3.6HG0621060.1, HORVU.MOREX.r3.6HG0623530.1, HORVU.MOREX.r3.6HG0624120.1, HORVU.MOREX.r3.6HG0624130.1, HORVU.MOREX.r3.6HG0624150.1, HORVU.MOREX.r3.6HG0624160.1, HORVU.MOREX.r3.6HG0624180.1, HORVU.MOREX.r3.6HG0624200.1, HORVU.MOREX.r3.6HG0626380.1, HORVU.MOREX.r3.6HG0630270.1, HORVU.MOREX.r3.6HG0630280.1, HORVU.MOREX.r3.6HG0630340.1, HORVU.MOREX.r3.6HG0630680.1, HORVU.MOREX.r3.6HG0631830.1, HORVU.MOREX.r3.6HG0631850.1, HORVU.MOREX.r3.6HG0631900.1, HORVU.MOREX.r3.6HG0631930.1, HORVU.MOREX.r3.6HG0631940.1.CDS1, HORVU.MOREX.r3.6HG0631950.1, HORVU.MOREX.r3.7HG0670060.1, HORVU.MOREX.r3.7HG0670080.1
Poaceae Lolium multiflorum 45 gene-QYE76_004096, gene-QYE76_007517, gene-QYE76_012696 ...
gene-QYE76_017907, gene-QYE76_019078, gene-QYE76_024287, gene-QYE76_026112, gene-QYE76_026355, gene-QYE76_026528, gene-QYE76_026531, gene-QYE76_026876, gene-QYE76_026877, gene-QYE76_026878, gene-QYE76_026879, gene-QYE76_026882, gene-QYE76_026883, gene-QYE76_026884, gene-QYE76_026885, gene-QYE76_026886, gene-QYE76_026889, gene-QYE76_026892, gene-QYE76_026895, gene-QYE76_026898, gene-QYE76_027942, gene-QYE76_035244, gene-QYE76_035445, gene-QYE76_035871, gene-QYE76_035874, gene-QYE76_037144, gene-QYE76_037772, gene-QYE76_037773, gene-QYE76_037775, gene-QYE76_037776, gene-QYE76_040454, gene-QYE76_045612, gene-QYE76_048345, gene-QYE76_049668, gene-QYE76_049690, gene-QYE76_052107, gene-QYE76_055844, gene-QYE76_055845, gene-QYE76_056792, gene-QYE76_058492, gene-QYE76_069059, gene-QYE76_071113
Poaceae Oryza coarctata 8 Oco03G025920, Oco03G025960, Oco04G026270, Oco04G026400 ...
Oco04G026440, Oco04G026450, Oco07G008910, Oco08G008850
Poaceae Oryza sativa 18 LOC_Os02g48300.1, LOC_Os02g54550.1, LOC_Os02g55050.1 ...
LOC_Os02g57860.1, LOC_Os02g57870.1, LOC_Os02g57880.1, LOC_Os02g57890.1, LOC_Os02g57910.1, LOC_Os02g57940.1, LOC_Os02g57960.1, LOC_Os02g57965.1, LOC_Os02g58040.1, LOC_Os04g40760.1, LOC_Os04g40770.1, LOC_Os04g40780.1, LOC_Os04g40800.1, LOC_Os04g40960.1, LOC_Os05g01630.1
Poaceae Paspalum vaginatum 2 gene-BS78_07G197900, gene-BS78_K113400
Poaceae Puccinellia tenuiflora 43 Pt_Chr0101770, Pt_Chr0107087, Pt_Chr0107530, Pt_Chr0200849 ...
Pt_Chr0202928, Pt_Chr0202963, Pt_Chr0202967, Pt_Chr0206868, Pt_Chr0305396, Pt_Chr0305398, Pt_Chr0307231, Pt_Chr0400814, Pt_Chr0400815, Pt_Chr0400816, Pt_Chr0400817, Pt_Chr0601234, Pt_Chr0603652, Pt_Chr0604297, Pt_Chr0604354, Pt_Chr0604439, Pt_Chr0604447, Pt_Chr0604448, Pt_Chr0604510, Pt_Chr0604605, Pt_Chr0604606, Pt_Chr0604627, Pt_Chr0604687, Pt_Chr0604696, Pt_Chr0604701, Pt_Chr0604706, Pt_Chr0604731, Pt_Chr0604737, Pt_Chr0604739, Pt_Chr0604744, Pt_Chr0604868, Pt_Chr0605582, Pt_Chr0605674, Pt_Chr0605677, Pt_Chr0605679, Pt_Chr0605681, Pt_Chr0605683, Pt_Chr0704415, Pt_Ctg00197
Poaceae Thinopyrum elongatum 31 Tel2E01G143700, Tel2E01G143800, Tel2E01G563900 ...
Tel2E01G595100, Tel2E01G942600, Tel2E01G943300, Tel3E01G455800, Tel3E01G455900, Tel5E01G002500, Tel5E01G559800, Tel6E01G136100, Tel6E01G136500, Tel6E01G254500, Tel6E01G265100, Tel6E01G285500, Tel6E01G311500, Tel6E01G566900, Tel6E01G636100, Tel6E01G636300, Tel6E01G716300, Tel6E01G716500, Tel6E01G716600, Tel6E01G716700, Tel6E01G717200, Tel6E01G717600, Tel6E01G749400, Tel6E01G750100, Tel6E01G751000, Tel7E01G429800, Tel7E01G430000, Tel7E01G717600
Poaceae Triticum dicoccoides 54 gene_TRIDC1AG009610, gene_TRIDC1BG012920 ...
gene_TRIDC2AG047050, gene_TRIDC2AG056290, gene_TRIDC2BG084660, gene_TRIDC3BG026460, gene_TRIDC3BG046280, gene_TRIDC4AG059300, gene_TRIDC5AG009660, gene_TRIDC5AG031100, gene_TRIDC5BG009830, gene_TRIDC5BG013230, gene_TRIDC5BG031390, gene_TRIDC6AG006830, gene_TRIDC6AG015090, gene_TRIDC6AG017380, gene_TRIDC6AG018230, gene_TRIDC6AG020090, gene_TRIDC6AG020990, gene_TRIDC6AG048000, gene_TRIDC6AG051070, gene_TRIDC6AG051110, gene_TRIDC6AG053650, gene_TRIDC6AG058480, gene_TRIDC6AG058490, gene_TRIDC6AG058500, gene_TRIDC6AG058510, gene_TRIDC6AG058540, gene_TRIDC6AG058860, gene_TRIDC6AG059710, gene_TRIDC6BG009700, gene_TRIDC6BG026850, gene_TRIDC6BG055250, gene_TRIDC6BG056000, gene_TRIDC6BG059830, gene_TRIDC6BG059880, gene_TRIDC6BG062520, gene_TRIDC6BG062590, gene_TRIDC6BG069340, gene_TRIDC6BG069380, gene_TRIDC6BG069400, gene_TRIDC6BG069410, gene_TRIDC6BG070690, gene_TRIDC6BG070710, gene_TRIDC6BG070730, gene_TRIDC6BG070740, gene_TRIDC6BG070760, gene_TRIDC6BG070850, gene_TRIDC6BG070860, gene_TRIDC6BG070870, gene_TRIDC6BG070880, gene_TRIDC7AG031140, gene_TRIDC7AG060020, gene_TRIDC7BG052800
Poaceae Triticum aestivum 130 TraesCS1A02G069800.1, TraesCS1B02G088100.1 ...
TraesCS1B02G091100.2, TraesCS2A02G064500.1, TraesCS2A02G342200.2, TraesCS2A02G344700.1, TraesCS2A02G390300.3, TraesCS2B02G242700.1, TraesCS2B02G361600.1, TraesCS2D02G320100.3, TraesCS2D02G320400.3, TraesCS2D02G323200.1, TraesCS2D02G388300.1, TraesCS2D02G554600.1, TraesCS3B02G184000.2, TraesCS3B02G310200.1, TraesCS3B02G360200.1, TraesCS3B02G439300.1, TraesCS3D02G323600.1, TraesCS3D02G401000.1, TraesCS4A02G289800.1, TraesCS4A02G383200.1, TraesCS4B02G024600.1, TraesCS5A02G062000.1, TraesCS5A02G192600.1, TraesCS5B02G059500.1, TraesCS5B02G059600.1, TraesCS5B02G080800.2, TraesCS5B02G181000.1, TraesCS5B02G181100.1, TraesCS5B02G351400.1, TraesCS5D02G356400.1, TraesCS6A02G129200.1, TraesCS6A02G129300.1, TraesCS6A02G135400.1, TraesCS6A02G146300.2, TraesCS6A02G319400.1, TraesCS6A02G340700.1, TraesCS6A02G341200.1, TraesCS6A02G358200.1, TraesCS6A02G358300.1, TraesCS6A02G396600.1, TraesCS6A02G396700.1, TraesCS6A02G396800.1, TraesCS6A02G396900.1, TraesCS6A02G397000.1, TraesCS6A02G397400.1, TraesCS6A02G397500.1, TraesCS6A02G397600.1, TraesCS6A02G397700.1, TraesCS6A02G400400.1, TraesCS6A02G406800.2, TraesCS6A02G406900.1, TraesCS6A02G407000.1, TraesCS6A02G407100.1, TraesCS6A02G407600.1, TraesCS6A02G407800.1, TraesCS6A02G407900.2, TraesCS6A02G408000.1, TraesCS6A02G408100.1, TraesCS6B02G073800.1, TraesCS6B02G112600.1, TraesCS6B02G142200.1, TraesCS6B02G143900.1, TraesCS6B02G157500.1, TraesCS6B02G163400.1, TraesCS6B02G179300.2, TraesCS6B02G344800.1, TraesCS6B02G349900.1, TraesCS6B02G372200.1, TraesCS6B02G372500.1, TraesCS6B02G390700.1, TraesCS6B02G390800.1, TraesCS6B02G390900.1, TraesCS6B02G391000.1, TraesCS6B02G436600.1, TraesCS6B02G436900.1, TraesCS6B02G437000.2, TraesCS6B02G437100.1, TraesCS6B02G437200.1, TraesCS6B02G437500.1, TraesCS6B02G440700.1, TraesCS6B02G451500.1, TraesCS6B02G451600.1, TraesCS6B02G451700.1, TraesCS6B02G451800.1, TraesCS6B02G451900.1, TraesCS6B02G452000.1, TraesCS6B02G452200.1, TraesCS6B02G452300.1, TraesCS6B02G452400.1, TraesCS6B02G452600.1, TraesCS6B02G452900.1, TraesCS6B02G453000.1, TraesCS6B02G453100.1, TraesCS6B02G453200.1, TraesCS6B02G453300.1, TraesCS6B02G453500.1, TraesCS6B02G453700.1, TraesCS6B02G453800.1, TraesCS6B02G453900.1, TraesCS6B02G454000.1, TraesCS6D02G104900.1, TraesCS6D02G124500.2, TraesCS6D02G141200.3, TraesCS6D02G304700.1, TraesCS6D02G321400.2, TraesCS6D02G340800.1, TraesCS6D02G340900.1, TraesCS6D02G341000.1, TraesCS6D02G341100.1, TraesCS6D02G381400.1, TraesCS6D02G381500.1, TraesCS6D02G381700.1, TraesCS6D02G381800.2, TraesCS6D02G384600.1, TraesCS6D02G390300.1, TraesCS6D02G390600.1, TraesCS6D02G390800.1, TraesCS6D02G391000.1, TraesCS6D02G391100.1, TraesCS6D02G391500.1, TraesCS6D02G391700.1, TraesCS6D02G391800.1, TraesCS6D02G391900.1, TraesCS7A02G084700.1, TraesCS7A02G243600.1, TraesCS7B02G329700.1, TraesCS7D02G421700.1, TraesCSU02G141900.1
Poaceae Zoysia japonica 1 nbis-gene-8304
Poaceae Zoysia macrostachya 2 Zma_g14714, Zma_g14715
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