Basic Information
Locus ID:
Oco08G007840
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG08 | 11726466 | 11728402 | - | Oco08G007840 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.32 | 51,612.35 Da | 54.94 | 96.04 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 39 | 79 | 1.3E-8 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 199 | 439 | 3.37E-10 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 37 | 87 | 1.31E-9 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 155 | 439 | 8.7E-12 | IPR032675 |
| SMART | SM00256 | fbox_2 | 43 | 83 | 0.0056 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 37 | 73 | 9.550458 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 39 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G78760.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_052151228.1 | MEIOTIC F-BOX protein MOF [Oryza glaberrima] | 0 |
| Q7X7A4 | MEIOTIC F-BOX protein MOF OS=Oryza sativa subsp. japonica OX=39947 GN=MOF PE=1 SV=2 | 0 | |
| TrEMBL | A0A0E0KRK9 | F-box domain-containing protein OS=Oryza punctata OX=4537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology