Basic Information
Locus ID:
Oco08G007830
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG08 | 11716930 | 11718850 | - | Oco08G007830 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.27 | 51,543.78 Da | 65.56 | 94.78 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 22 | 59 | 0.001 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 20 | 73 | 4.19E-8 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 300 | 412 | 5.65E-10 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 113 | 422 | 2.9E-12 | IPR032675 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 20 | 73 | 8.543671 | IPR001810 |
| Coils | Coil | Coil | 461 | 462 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G03040.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_052152603.1 | MEIOTIC F-BOX protein MOF-like [Oryza glaberrima] | 0 |
| Q7X7A4 | MEIOTIC F-BOX protein MOF OS=Oryza sativa subsp. japonica OX=39947 GN=MOF PE=1 SV=2 | 0 | |
| TrEMBL | A0A0E0H1U6 | F-box domain-containing protein OS=Oryza nivara OX=4536 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology