halophFGD

Basic Information

Locus ID: Oco08G006620

Species & Taxonomic ID: Oryza coarctata & 77588

Genome Assembly: GCA_030770085.1

Description: FMN binding

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
LG08	10746586	10750951	-	Oco08G006620

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.21	46,341.20 Da	41.52	76.27	-0.33

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd02933	OYE_like_FMN	54	383	1.63254E-175	-
Pfam	PF00724	NADH:flavin oxidoreductase / NADH oxidase family	55	377	1.0E-75	IPR001155
SUPERFAMILY	SSF51395	FMN-linked oxidoreductases	53	401	2.28E-110	-
Gene3D	G3DSA:3.20.20.70	Aldolase class I	48	403	4.3E-129	IPR013785

Gene Ontology

Molecular Function:

GO:0003824 (catalytic activity) GO:0010181 (FMN binding) GO:0016491 (oxidoreductase activity)

KEGG Pathway

KO Term:

K05894 (12-oxophytodienoic acid reductase [EC:1.3.1.42])

Pathway:

ko00592 (alpha-Linolenic acid metabolism) map00592 (alpha-Linolenic acid metabolism) ko01100 (Metabolic pathways) map01100 (Metabolic pathways) ko01110 (Biosynthesis of secondary metabolites) map01110 (Biosynthesis of secondary metabolites)

Module:

M00113 (Jasmonic acid biosynthesis)

Reaction:

R03401 ((9S,13S,15Z)-12-Oxo-10,11-dihydrophyto-15-enoate + NADP+ <=> (9S,13S,15Z)-12-Oxophyto-10,15-dienoate + NADPH + H+)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G76680.1	12-oxophytodienoate reductase 1. Encodes a member of an alpha/beta barrel fold family of FMN-containing oxidoreductases. One of the closely related 12-oxophytodienoic acid reductases. This enzyme is not expected to participate in jasmonic acid biosynthesis because during in vitro assays, it shows very little activity with the naturally occurring OPDA isomer. Shows activity towards 2,4,6-trinitrotoluene. Expressed predominately in root. Up-regulated by senescence and jasmonic acid. Induced by salicylic acid. Independent of NPR1 for their induction by salicylic acid. Predicted to be a cytosolic protein.
RefSeq	XP_015620839.1	putative 12-oxophytodienoate reductase 13 isoform X1 [Oryza sativa Japonica Group]
Swiss-Prot	B9FFD3	Putative 12-oxophytodienoate reductase 13 OS=Oryza sativa subsp. japonica OX=39947 GN=OPR13 PE=2 SV=1
TrEMBL	A0A6G1BR61	Oxidored_FMN domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_002659 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	8	jg1313, jg17907, jg23301, jg27463, jg2817, jg2818, jg28360 ... jg28361
Aizoaceae	Mesembryanthemum crystallinum	5	gene_840, gene_841, gene_842, gene_848, gene_850
Amaranthaceae	Atriplex hortensis	4	Ah024918, Ah024921, Ah024937, Ah038608
Amaranthaceae	Beta vulgaris	2	BVRB_1g012610, BVRB_7g171950
Amaranthaceae	Salicornia bigelovii	3	Sbi_jg24283, Sbi_jg54641, Sbi_jg8114
Amaranthaceae	Salicornia europaea	2	Seu_jg11156, Seu_jg11906
Amaranthaceae	Suaeda aralocaspica	1	GOSA_00012633
Amaranthaceae	Suaeda glauca	11	Sgl14771, Sgl15027, Sgl19920, Sgl20162, Sgl78040, Sgl78226 ... Sgl78227, Sgl78310, Sgl80546, Sgl80717, Sgl80718
Amaranthaceae	Chenopodium album	12	gene:ENSEOMG00000013822, gene:ENSEOMG00000015040 ... gene:ENSEOMG00000015937, gene:ENSEOMG00000017815, gene:ENSEOMG00000034087, gene:ENSEOMG00000034372, gene:ENSEOMG00000034979, gene:ENSEOMG00000035641, gene:ENSEOMG00000038437, gene:ENSEOMG00000046106, gene:ENSEOMG00000047333, gene:ENSEOMG00000049130
Amaranthaceae	Chenopodium quinoa	7	CQ.Regalona.r1.1AG0016460, CQ.Regalona.r1.1AG0016480 ... CQ.Regalona.r1.1AG0016520, CQ.Regalona.r1.1BG0009120, CQ.Regalona.r1.1BG0009140, CQ.Regalona.r1.1BG0009150, CQ.Regalona.r1.9AG0000450
Anacardiaceae	Pistacia vera	5	pistato.v30034870, pistato.v30034880, pistato.v30034990 ... pistato.v30095410, pistato.v30192290
Apiaceae	Apium graveolens	6	Ag3G01299, Ag3G01300, Ag3G01301, Ag9G01514, AgUnG00294 ... AgUnG00296
Arecaceae	Cocos nucifera	4	scaffold001336G000190, scaffold001336G000200 ... scaffold001336G000210, scaffold046983G000010
Arecaceae	Phoenix dactylifera	5	gene-LOC103701623, gene-LOC103704760, gene-LOC103704761 ... gene-LOC108510666, gene-LOC120112143
Asparagaceae	Asparagus officinalis	5	AsparagusV1_02.559.V1.1, AsparagusV1_04.2629.V1.1 ... AsparagusV1_04.2803.V1.1, AsparagusV1_09.387.V1.1, AsparagusV1_Unassigned.332.V1.1
Asteraceae	Flaveria trinervia	4	Ftri12G04282, Ftri15G17904, Ftri17G19582, Ftri4G01576
Brassicaceae	Arabidopsis thaliana	5	AT1G09400.1, AT1G17990.1, AT1G18020.1, AT1G76680.2 ... AT1G76690.1
Brassicaceae	Eutrema salsugineum	4	Thhalv10009352m.g.v1.0, Thhalv10009775m.g.v1.0 ... Thhalv10013817m.g.v1.0, Thhalv10018727m.g.v1.0
Brassicaceae	Schrenkiella parvula	3	Sp1g08010.v2.2, Sp5g31840.v2.2, Sp6g27290.v2.2
Brassicaceae	Brassica nigra	5	BniB02g045910.2N, BniB03g003260.2N, BniB03g027870.2N ... BniB05g069440.2N, BniB05g073180.2N
Casuarinaceae	Casuarina equisetifolia	7	Ceq02G1689, Ceq02G1690, Ceq02G1692, Ceq02G1694, Ceq02G1695 ... Ceq02G1696, Ceq03G1393
Casuarinaceae	Casuarina glauca	6	Cgl02G1763, Cgl02G1764, Cgl02G1765, Cgl02G1767, Cgl02G1768 ... Cgl03G1526
Cymodoceaceae	Cymodocea nodosa	5	gene.Cymno08g06220, gene.Cymno08g06230, gene.Cymno08g06240 ... gene.Cymno08g06260, gene.Cymno08g06270
Dunaliellaceae	Dunaliella salina	2	Dusal.0088s00021.v1.0, Dusal.0088s00024.v1.0
Hydrocharitaceae	Thalassia testudinum	3	gene.Thate05g09310, gene.Thate05g09320, gene.Thate05g09330
Malvaceae	Hibiscus hamabo Siebold & Zucc.	2	nbisL1-mrna-681, nbisL1-mrna-683
Nitrariaceae	Nitraria sibirica	4	evm.TU.LG03.1590, evm.TU.LG03.1591, evm.TU.LG03.1592 ... evm.TU.LG06.1131
Plantaginaceae	Plantago ovata	6	Pov_00001906, Pov_00020153, Pov_00021262, Pov_00039990 ... Pov_00040221, Pov_00040222
Plumbaginaceae	Limonium bicolor	3	Lb2G11516, Lb2G11537, Lb2G11538
Poaceae	Echinochloa crus-galli	31	AH02.1631, AH05.676, AH06.792, AH06.793, AH06.794, AH06.798 ... AH06.799, AH07.2233, AH09.1096, AH09.1098, AH09.1099, BH02.1728, BH05.727, BH06.842, BH06.843, BH06.845, BH06.846, BH07.3880, BH09.1190, BH09.1191, CH02.1910, CH05.831, CH06.877, CH06.879, CH06.880, CH06.881, CH06.882, CH06.883, CH07.2108, CH09.1315, CH09.1316
Poaceae	Eleusine coracana subsp. coracana	12	gene-QOZ80_1AG0016830, gene-QOZ80_1BG0065890 ... gene-QOZ80_2AG0134300, gene-QOZ80_2BG0189790, gene-QOZ80_4AG0316400, gene-QOZ80_4BG0347610, gene-QOZ80_5AG0408690, gene-QOZ80_5BG0452440, gene-QOZ80_6AG0513710, gene-QOZ80_6AG0513740, gene-QOZ80_6AG0513750, gene-QOZ80_6BG0465510
Poaceae	Hordeum vulgare	12	HORVU.MOREX.r3.1HG0002260.1, HORVU.MOREX.r3.1HG0002280.1 ... HORVU.MOREX.r3.1HG0002380.1, HORVU.MOREX.r3.1HG0057660.1, HORVU.MOREX.r3.2HG0099170.1, HORVU.MOREX.r3.2HG0170580.1, HORVU.MOREX.r3.2HG0170590.1, HORVU.MOREX.r3.4HG0413740.1, HORVU.MOREX.r3.7HG0664240.1, HORVU.MOREX.r3.7HG0664250.1, HORVU.MOREX.r3.7HG0664260.1, HORVU.MOREX.r3.7HG0664270.1
Poaceae	Lolium multiflorum	30	gene-QYE76_008549, gene-QYE76_008589, gene-QYE76_008591 ... gene-QYE76_008592, gene-QYE76_008593, gene-QYE76_008594, gene-QYE76_008597, gene-QYE76_016011, gene-QYE76_016012, gene-QYE76_016013, gene-QYE76_016015, gene-QYE76_016094, gene-QYE76_016095, gene-QYE76_016096, gene-QYE76_017891, gene-QYE76_017892, gene-QYE76_017893, gene-QYE76_023482, gene-QYE76_028474, gene-QYE76_028657, gene-QYE76_028658, gene-QYE76_028659, gene-QYE76_044171, gene-QYE76_044172, gene-QYE76_044360, gene-QYE76_048352, gene-QYE76_057033, gene-QYE76_066458, gene-QYE76_071194, gene-QYE76_071294
Poaceae	Oryza coarctata	9	Oco02G010760, Oco03G012780, Oco04G013570, Oco08G006600 ... Oco08G006610, Oco08G006620, Oco11G005250, Oco12G005270, Oco12G005290
Poaceae	Oryza sativa	10	ChrSy.fgenesh.mRNA.69, ChrUn.fgenesh.mRNA.96 ... LOC_Os01g27230.1, LOC_Os02g35310.1, LOC_Os06g11200.1, LOC_Os06g11210.1, LOC_Os06g11240.1, LOC_Os06g11260.1, LOC_Os06g11280.1, LOC_Os06g11290.1
Poaceae	Paspalum vaginatum	24	gene-BS78_04G164500, gene-BS78_05G142800, gene-BS78_K106800 ... gene-BS78_05G179600, gene-BS78_05G196400, gene-BS78_06G107000, gene-BS78_06G107100, gene-BS78_06G107300, gene-BS78_10G087400, gene-BS78_10G087500, gene-BS78_10G087600, gene-BS78_10G087700, gene-BS78_10G087800, gene-BS78_10G087900, gene-BS78_10G088000, gene-BS78_10G088100, gene-BS78_10G088200, gene-BS78_10G088300, gene-BS78_10G179300, gene-BS78_K106900, gene-BS78_K107000, gene-BS78_K107100, gene-BS78_K107200, gene-BS78_K107300
Poaceae	Puccinellia tenuiflora	14	Pt_Chr0100523, Pt_Chr0108106, Pt_Chr0202458, Pt_Chr0202463 ... Pt_Chr0307496, Pt_Chr0307497, Pt_Chr0402293, Pt_Chr0404929, Pt_Chr0404933, Pt_Chr0404934, Pt_Chr0404936, Pt_Chr0503984, Pt_Chr0504072, Pt_Chr0605840
Poaceae	Sporobolus alterniflorus	9	Chr06G009610, Chr11G020150, Chr14G003800, Chr15G011200 ... Chr17G010930, Chr23G012380, Chr25G007460, Chr26G007160, Chr26G007170
Poaceae	Thinopyrum elongatum	14	Tel1E01G032600, Tel1E01G035400, Tel1E01G368900 ... Tel2E01G076900, Tel2E01G077000, Tel2E01G1052700, Tel2E01G546700, Tel4E01G584500, Tel6E01G057100, Tel6E01G570800, Tel6E01G760300, Tel6E01G766900, Tel7E01G288100, Tel7E01G288300
Poaceae	Triticum dicoccoides	29	gene_TRIDC1AG001680, gene_TRIDC1AG001690 ... gene_TRIDC1AG001700, gene_TRIDC1AG032850, gene_TRIDC1BG002420, gene_TRIDC1BG002430, gene_TRIDC1BG038160, gene_TRIDC2AG002750, gene_TRIDC2AG045320, gene_TRIDC2AG045330, gene_TRIDC2BG003120, gene_TRIDC2BG047940, gene_TRIDC2BG047960, gene_TRIDC4AG067190, gene_TRIDC4BG007580, gene_TRIDC4BG007600, gene_TRIDC4BG007620, gene_TRIDC4BG059530, gene_TRIDC5AG074490, gene_TRIDC6AG048380, gene_TRIDC6BG056540, gene_TRIDC6BG072040, gene_TRIDC6BG072390, gene_TRIDC7AG021710, gene_TRIDC7AG021720, gene_TRIDC7BG011880, gene_TRIDC7BG011890, gene_TRIDC7BG011900, gene_TRIDC7BG071430
Poaceae	Triticum aestivum	41	TraesCS1A02G015500.1, TraesCS1A02G015600.1 ... TraesCS1A02G015700.1, TraesCS1A02G015800.1, TraesCS1A02G217700.1, TraesCS1B02G018700.1, TraesCS1B02G018800.1, TraesCS1B02G019600.1, TraesCS1B02G019700.1, TraesCS1B02G019800.1, TraesCS1B02G231000.2, TraesCS1D02G013000.1, TraesCS1D02G013400.1, TraesCS1D02G013500.1, TraesCS1D02G013600.1, TraesCS1D02G013700.1, TraesCS1D02G219500.1, TraesCS2A02G026600.1, TraesCS2A02G311200.3, TraesCS2B02G040000.1, TraesCS2B02G328100.1, TraesCS2B02G328200.1, TraesCS2D02G028600.1, TraesCS2D02G309400.1, TraesCS2D02G309500.1, TraesCS4B02G048500.1, TraesCS4B02G356100.1, TraesCS4D02G349500.1, TraesCS5A02G525300.1, TraesCS6B02G353200.2, TraesCS6B02G464800.1, TraesCS6D02G302300.2, TraesCS7A02G174500.1, TraesCS7A02G174700.1, TraesCS7B02G079300.1, TraesCS7B02G079400.1.cds1, TraesCS7B02G079500.1, TraesCS7D02G175700.2, TraesCS7D02G175800.1, TraesCS7D02G175900.2, TraesCS7D02G176000.1.cds1
Poaceae	Zea mays	6	Zm00001eb082050_P002, Zm00001eb131870_P001 ... Zm00001eb279210_P001, Zm00001eb356160_P001, Zm00001eb373030_P001, Zm00001eb373050_P001
Poaceae	Zoysia japonica	10	nbis-gene-20719, nbis-gene-23457, nbis-gene-27299 ... nbis-gene-35061, nbis-gene-35065, nbis-gene-37772, nbis-gene-37774, nbis-gene-58868, nbis-gene-7603, nbis-gene-7605
Poaceae	Zoysia macrostachya	8	Zma_g13709, Zma_g18571, Zma_g19754, Zma_g19755, Zma_g21334 ... Zma_g26463, Zma_g31583, Zma_g31585
Portulacaceae	Portulaca oleracea	8	evm.TU.LG01.1002, evm.TU.LG04.1236, evm.TU.LG04.1237 ... evm.TU.LG04.1247, evm.TU.LG05.1774, evm.TU.LG05.1775, evm.TU.LG09.1473, evm.TU.LG23.27
Posidoniaceae	Posidonia oceanica	2	gene.Posoc05g12190, gene.Posoc05g12210
Rhizophoraceae	Bruguiera sexangula	3	evm.TU.Scaffold_16_RagTag.896, evm.TU.Scaffold_1_RagTag.848 ... evm.TU.Scaffold_8_RagTag.1363
Rhizophoraceae	Carallia pectinifolia	4	nbisL1-mrna-23828, nbisL1-mrna-25073, nbisL1-mrna-25074 ... nbisL1-mrna-9157
Rhizophoraceae	Ceriops tagal	4	nbisL1-mrna-11657, nbisL1-mrna-1752, nbisL1-mrna-5980 ... nbisL1-mrna-8124
Rhizophoraceae	Ceriops zippeliana	5	nbisL1-mrna-12261, nbisL1-mrna-12262, nbisL1-mrna-12265 ... nbisL1-mrna-15288, nbisL1-mrna-22189
Rhizophoraceae	Kandelia candel	4	evm.TU.utg000005l.49, evm.TU.utg000016l.935 ... evm.TU.utg000018l.213, evm.TU.utg000022l.37
Rhizophoraceae	Kandelia obovata	3	Maker00003047, Maker00008491, Maker00016027
Rhizophoraceae	Rhizophora apiculata	5	nbisL1-mrna-1003, nbisL1-mrna-14895, nbisL1-mrna-20148 ... nbisL1-mrna-37, nbisL1-mrna-9557
Rhizophoraceae	Rhizophora mangle	10	nbisL1-mrna-18737, nbisL1-mrna-20693, nbisL1-mrna-20695 ... nbisL1-mrna-20696, nbisL1-mrna-20697, nbisL1-mrna-20698, nbisL1-mrna-20699, nbisL1-mrna-23015, nbisL1-mrna-23016, nbisL1-mrna-930
Salicaceae	Populus euphratica	5	populus_peu16528, populus_peu16530, populus_peu16531 ... populus_peu16532, populus_peu16533
Solanaceae	Lycium barbarum	3	gene-LOC132605279, gene-LOC132626882, gene-LOC132626883
Solanaceae	Solanum chilense	3	SOLCI000596800, SOLCI000881200, SOLCI003729600
Solanaceae	Solanum pennellii	2	gene-LOC107022331, gene-LOC107031976
Tamaricaceae	Reaumuria soongarica	1	gene_9131
Tamaricaceae	Tamarix chinensis	1	TC10G0779
Zosteraceae	Zostera marina	2	Zosma02g21550.v3.1, Zosma07g01750.v3.1