Basic Information
Locus ID:
Oco08G006490
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG08 | 10602961 | 10612061 | + | Oco08G006490 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.61 | 51,429.39 Da | 58.82 | 69.50 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF81383 | F-box domain | 14 | 74 | 7.19E-9 | IPR036047 |
| SMART | SM00256 | fbox_2 | 15 | 55 | 2.7E-4 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 269 | 355 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 287 | 309 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 269 | 286 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 310 | 324 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 325 | 341 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_047053327.1 | uncharacterized protein LOC124659501 [Lolium rigidum] | 0 |
| TrEMBL | A0A0D9W5C7 | F-box domain-containing protein OS=Leersia perrieri OX=77586 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 8 | gene-QYE76_058040, gene-QYE76_058345, gene-QYE76_058350 ... |
| Poaceae | Oryza coarctata | 3 | Oco07G006560, Oco08G006490, Oco12G008020 |