Basic Information
Locus ID:
Oco08G006450
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG08 | 10547926 | 10548759 | - | Oco08G006450 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.51 | 27,824.08 Da | 86.10 | 75.61 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 29 | 62 | 1.1E-4 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 13 | 78 | 2.09E-10 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 102 | 163 | 2.25E-5 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 21 | 68 | 4.6E-8 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80470.1 | F-box/RNI-like/FBD-like domains-containing protein. | 0 |
| RefSeq | XP_015634845.1 | MEIOTIC F-BOX protein MOF [Oryza sativa Japonica Group] | 0 |
| Q9M8L5 | F-box/FBD/LRR-repeat protein At1g80470 OS=Arabidopsis thaliana OX=3702 GN=At1g80470 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0E0P9J5 | F-box domain-containing protein OS=Oryza rufipogon OX=4529 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology