Basic Information
Locus ID:
Oco08G006410
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG08 | 10506555 | 10509002 | - | Oco08G006410 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.03 | 85,629.45 Da | 46.75 | 83.20 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 483 | 779 | 6.24122E-88 | - |
| Pfam | PF00069 | Protein kinase domain | 480 | 774 | 8.7E-38 | IPR000719 |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 129 | 371 | 6.54E-15 | IPR009091 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 459 | 777 | 1.01E-68 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 566 | 788 | 1.3E-48 | - |
| Gene3D | G3DSA:2.130.10.30 | - | 116 | 361 | 1.8E-12 | IPR009091 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 445 | 565 | 7.1E-29 | - |
| SMART | SM00220 | serkin_6 | 477 | 782 | 5.8E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 477 | 781 | 35.608505 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 483 | 505 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 614 | 626 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47850.1 | CRINKLY4 related 4. | 0 |
| RefSeq | XP_015634131.1 | serine/threonine-protein kinase-like protein CCR4 [Oryza sativa Japonica Group] | 0 |
| Q9FIJ6 | Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana OX=3702 GN=CCR4 PE=1 SV=1 | 0 | |
| TrEMBL | Q0JD03 | OJ000114_01.11 protein OS=Oryza sativa subsp. japonica OX=39947 GN=OJ000114_01.11 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology