Basic Information
Locus ID:
Oco08G005130
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Alkaline and neutral invertase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG08 | 9199723 | 9202746 | + | Oco08G005130 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.68 | 64,180.82 Da | 51.30 | 87.33 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12899 | Alkaline and neutral invertase | 89 | 530 | 2.3E-211 | IPR024746 |
| SUPERFAMILY | SSF48208 | Six-hairpin glycosidases | 106 | 530 | 1.12E-46 | IPR008928 |
| Gene3D | G3DSA:1.50.10.10 | - | 122 | 523 | 4.4E-10 | IPR012341 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 85 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G22510.1 | alkaline/neutral invertase. Encodes a chloroplast-targeted alkaline/neutral invertase that is implicated in the development of the photosynthetic apparatus and nitrogen assimilation in seedlings to control the sucrose to hexose ratio. | 0 |
| RefSeq | XP_015635866.1 | neutral/alkaline invertase 3, chloroplastic-like [Oryza sativa Japonica Group] | 0 |
| Q6H6N5 | Neutral/alkaline invertase 3, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=NIN3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0E0KQ85 | Alkaline/neutral invertase OS=Oryza punctata OX=4537 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology