Basic Information
Locus ID:
Oco08G004270
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Domain of unknown function (DUF3444)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG08 | 8120857 | 8125476 | + | Oco08G004270 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.86 | 82,409.86 Da | 36.55 | 64.31 | -0.74 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06257 | DnaJ | 68 | 121 | 1.82122E-22 | IPR001623 |
| Pfam | PF11926 | Domain of unknown function (DUF3444) | 490 | 696 | 3.6E-73 | IPR024593 |
| Pfam | PF00226 | DnaJ domain | 68 | 129 | 7.3E-22 | IPR001623 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 63 | 128 | 2.22E-23 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 55 | 160 | 4.9E-24 | IPR036869 |
| SMART | SM00271 | dnaj_3 | 67 | 124 | 9.9E-25 | IPR001623 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 68 | 132 | 18.927181 | IPR001623 |
| ProSitePatterns | PS00636 | Nt-dnaJ domain signature. | 109 | 128 | - | IPR018253 |
| PRINTS | PR00625 | DnaJ domain signature | 104 | 124 | 1.3E-14 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 70 | 88 | 1.3E-14 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 88 | 103 | 1.3E-14 | IPR001623 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 299 | 345 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 232 | 260 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G53150.2 | - | 0 |
| RefSeq | XP_052151481.1 | uncharacterized protein LOC127769859 [Oryza glaberrima] | 0 |
| O89114 | DnaJ homolog subfamily B member 5 OS=Mus musculus OX=10090 GN=Dnajb5 PE=2 SV=1 | 0 | |
| TrEMBL | I1P0N3 | J domain-containing protein OS=Oryza glaberrima OX=4538 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology