HalophFGD

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Basic Information
Locus ID: Oco08G002160
Species & Taxonomic ID: Oryza coarctata & 77588
Genome Assembly: GCA_030770085.1
Description: LRR-repeat protein
Maps and Mapping Data
Chromosome Start End Strand ID
LG08 4038819 4039392 - Oco08G002160
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
10.12 20,590.81 Da 49.05 87.77 -0.24
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Best hit
Source Best Hit ID Description E-value
RefSeq XP_052154326.1 F-box/FBD/LRR-repeat protein At5g22660-like [Oryza glaberrima] 0
TrEMBL A0A0E0KNI1 F-box domain-containing protein OS=Oryza punctata OX=4537 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Asparagaceae Asparagus officinalis 2 AsparagusV1_03.840.V1.1, AsparagusV1_03.841.V1.1
Poaceae Echinochloa crus-galli 16 AH05.2790, AH09.546, AH09.573, AH09.577, BH04.1290, BH09.662 ...
BH04.2137, BH04.2144, CH03.599, CH05.2891, CH05.2893, CH09.2376, CH09.2706, CH09.2708, CH09.2709, CH09.665
Poaceae Eleusine coracana subsp. coracana 9 gene-QOZ80_2AG0114350, gene-QOZ80_4AG0324470 ...
gene-QOZ80_5AG0376320, gene-QOZ80_5BG0423540, gene-QOZ80_9AG0690900, gene-QOZ80_9AG0690910, gene-QOZ80_9BG0715310, gene-QOZ80_9BG0717210, gene-QOZ80_9BG0717220
Poaceae Hordeum vulgare 7 HORVU.MOREX.r3.2HG0106560.1.CDS1 ...
HORVU.MOREX.r3.2HG0106730.1.CDS1, HORVU.MOREX.r3.2HG0194620.1.CDS1, HORVU.MOREX.r3.2HG0200500.1.CDS1, HORVU.MOREX.r3.2HG0200520.1.CDS1, HORVU.MOREX.r3.2HG0200660.1.CDS1, HORVU.MOREX.r3.3HG0313980.1.CDS1
Poaceae Lolium multiflorum 37 gene-QYE76_009133, gene-QYE76_018843, gene-QYE76_019818 ...
gene-QYE76_026968, gene-QYE76_028965, gene-QYE76_036425, gene-QYE76_038437, gene-QYE76_038440, gene-QYE76_038449, gene-QYE76_038450, gene-QYE76_038454, gene-QYE76_038459, gene-QYE76_039080, gene-QYE76_039893, gene-QYE76_039896, gene-QYE76_041884, gene-QYE76_047124, gene-QYE76_047126, gene-QYE76_047128, gene-QYE76_047130, gene-QYE76_047133, gene-QYE76_047135, gene-QYE76_047140, gene-QYE76_047142, gene-QYE76_047145, gene-QYE76_047147, gene-QYE76_047150, gene-QYE76_047154, gene-QYE76_047158, gene-QYE76_049310, gene-QYE76_049311, gene-QYE76_057702, gene-QYE76_057707, gene-QYE76_065808, gene-QYE76_065812, gene-QYE76_065819, gene-QYE76_065824
Poaceae Oryza coarctata 1 Oco08G002160
Poaceae Oryza sativa 6 LOC_Os04g19810.1, LOC_Os04g19920.1, LOC_Os05g39300.1 ...
LOC_Os11g33180.1, LOC_Os11g33210.1, LOC_Os11g42310.1
Poaceae Paspalum vaginatum 5 gene-BS78_04G092800, gene-BS78_05G225800 ...
gene-BS78_05G226000, gene-BS78_09G116200, gene-BS78_09G116400
Poaceae Puccinellia tenuiflora 8 Pt_Chr0300409, Pt_Chr0300411, Pt_Chr0300412, Pt_Chr0300435 ...
Pt_Chr0305575, Pt_Chr0305577, Pt_Chr0404384, Pt_Chr0500148
Poaceae Sporobolus alterniflorus 4 Chr09G009220, Chr16G004370, Chr16G004500, Chr26G003030
Poaceae Thinopyrum elongatum 8 Tel1E01G132600, Tel2E01G165600, Tel2E01G790600 ...
Tel2E01G829500, Tel2E01G829900, Tel2E01G830400, Tel2E01G830600, Tel3E01G721600
Poaceae Triticum dicoccoides 13 gene_TRIDC1BG010830, gene_TRIDC2AG008420 ...
gene_TRIDC2AG068990, gene_TRIDC2AG069110, gene_TRIDC2BG009780, gene_TRIDC2BG071530, gene_TRIDC2BG074610, gene_TRIDC2BG074700, gene_TRIDC2BG074780, gene_TRIDC2BG074800, gene_TRIDC2BG074810, gene_TRIDC2BG074830, gene_TRIDC2BG074860
Poaceae Triticum aestivum 27 TraesCS1D02G064800.1, TraesCS2A02G075700.1.cds1 ...
TraesCS2A02G075900.1.cds1, TraesCS2A02G468600.1, TraesCS2A02G489200.1.cds1, TraesCS2B02G090500.1.cds1, TraesCS2B02G491500.1, TraesCS2B02G517100.1.cds1, TraesCS2B02G517300.1.cds1, TraesCS2B02G517900.1.cds1, TraesCS2B02G518200.1, TraesCS2D02G074600.1.cds1, TraesCS2D02G489500.1.cds1, TraesCS2D02G489800.1.cds1, TraesCS2D02G490200.1.cds1, TraesCS3A02G455300.1, TraesCS3A02G455400.1, TraesCS3B02G444700.1, TraesCS3B02G445800.1.cds1, TraesCS3B02G494100.1, TraesCS3B02G494400.1.cds1, TraesCS3B02G494900.1.cds1, TraesCS3B02G495000.1.cds1, TraesCS3B02G495100.1.cds1, TraesCS3D02G405600.1.cds1, TraesCS3D02G448200.1.cds1, TraesCS3D02G448300.1.cds1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.