Basic Information
Locus ID:
Oco08G001920
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Wall-associated receptor kinase galacturonan-binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG08 | 3265969 | 3273536 | - | Oco08G001920 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.35 | 40,500.47 Da | 36.57 | 70.16 | -0.22 |
Protein Domain:
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21270.1 | wall-associated kinase 2. cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. | 0 |
| RefSeq | XP_003581059.1 | wall-associated receptor kinase 2 [Brachypodium distachyon] | 0 |
| Q9LMP1 | Wall-associated receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=WAK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0P0W7Q8 | Os04g0220300 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0220300 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 4 | AH04.2283, BH04.2243, CH03.2334, CH04.2670 |
| Poaceae | Eleusine coracana subsp. coracana | 5 | gene-QOZ80_9AG0692750, gene-QOZ80_9AG0692840 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0103900.1 |
| Poaceae | Oryza coarctata | 4 | Oco08G001920, Oco08G001950, Oco18G001800, Oco21G009920 |
| Poaceae | Oryza sativa | 10 | ChrSy.fgenesh.mRNA.14, LOC_Os04g14304.1, LOC_Os11g46860.1 ... |
| Poaceae | Paspalum vaginatum | 17 | gene-BS78_05G102300, gene-BS78_05G242700, gene-BS78_K099700 ... |
| Poaceae | Puccinellia tenuiflora | 3 | Pt_Chr0205048, Pt_Chr0205049, Pt_Chr0205050 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr07G013790, Chr0G006760, Chr31G008600 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G159400 |
| Poaceae | Triticum dicoccoides | 7 | gene_TRIDC2AG008000, gene_TRIDC2AG008010 ... |
| Poaceae | Triticum aestivum | 8 | TraesCS2A02G071800.1, TraesCS2A02G071900.1 ... |
| Poaceae | Zoysia japonica | 3 | nbis-gene-18470, nbis-gene-18479, nbis-gene-37655 |