Basic Information
Locus ID:
Oco07G020170
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Protein-only RNase P
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG07 | 23007467 | 23014781 | + | Oco07G020170 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.91 | 39,243.67 Da | 39.10 | 77.28 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 1 | 94 | 5.0E-28 | IPR033443 |
| Pfam | PF16953 | Protein-only RNase P | 119 | 345 | 7.5E-53 | IPR031595 |
| Gene3D | G3DSA:3.40.50.11980 | - | 137 | 313 | 4.3E-50 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 327 | 346 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 332 | 346 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32230.1 | proteinaceous RNase P 1. RNase P able to cleave tRNA-like structures involved in the maturation of plant mitochondrial mRNAs. | 0 |
| RefSeq | XP_015691632.2 | proteinaceous RNase P 1, chloroplastic/mitochondrial-like [Oryza brachyantha] | 0 |
| Q66GI4 | Proteinaceous RNase P 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PRORP1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6G1C4P0 | ribonuclease P OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_013923 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology