Basic Information
Locus ID:
Oco07G019460
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG07 | 22398378 | 22403000 | + | Oco07G019460 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.69 | 15,658.47 Da | 38.13 | 70.58 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 40 | 100 | 8.91E-7 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 54 | 108 | 7.1E-6 | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_015691619.1 | cyclin-dependent kinase 12-like [Oryza brachyantha] | 0 |
| TrEMBL | A0A0E0DKA9 | Protein kinase domain-containing protein OS=Oryza meridionalis OX=40149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_005728, gene-QYE76_047953 |
| Poaceae | Oryza coarctata | 2 | Oco03G020170, Oco07G019460 |
| Poaceae | Oryza sativa | 2 | LOC_Os02g49040.1, LOC_Os03g21770.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_07G198300 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC5BG033810 |