Basic Information
Locus ID:
Oco07G017850
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG07 | 21033664 | 21036411 | + | Oco07G017850 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.16 | 47,670.31 Da | 47.49 | 81.38 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 100 | 368 | 3.79205E-89 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 97 | 366 | 2.5E-45 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 75 | 367 | 1.64E-76 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 69 | 170 | 5.1E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 171 | 372 | 9.9E-57 | - |
| SMART | SM00220 | serkin_6 | 94 | 366 | 2.8E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 94 | 380 | 36.357609 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 100 | 122 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 216 | 228 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 387 | 429 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G34300.1 | lectin protein kinase family protein. | 0 |
| RefSeq | XP_006652937.1 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Oryza brachyantha] | 0 |
| Q9XID3 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 OS=Arabidopsis thaliana OX=3702 GN=At1g34300 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6G1BSG9 | Protein kinase domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_004192 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology