Basic Information
Locus ID:
Oco07G015640
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Ethylene-responsive protein kinase Le-CTR1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG07 | 19057229 | 19062631 | + | Oco07G015640 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.80 | 88,310.89 Da | 46.01 | 89.42 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 523 | 801 | 1.76045E-119 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 517 | 801 | 3.6E-60 | IPR001245 |
| Pfam | PF14381 | Ethylene-responsive protein kinase Le-CTR1 | 161 | 372 | 2.1E-66 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 499 | 801 | 4.23E-74 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 626 | 809 | 2.9E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 510 | 594 | 2.5E-35 | - |
| SMART | SM00220 | serkin_6 | 517 | 809 | 4.1E-44 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 517 | 805 | 41.629589 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 523 | 544 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 668 | 680 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 81 | 102 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 81 | 99 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G24480.3 | - | 0 |
| RefSeq | XP_052152019.1 | serine/threonine-protein kinase CTR1-like isoform X3 [Oryza glaberrima] | 0 |
| Q05609 | Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana OX=3702 GN=CTR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6G1C1J0 | Protein kinase domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_033912 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology