Basic Information
Locus ID:
Oco07G009000
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
F-Box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG07 | 12677499 | 12681227 | - | Oco07G009000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.51 | 49,394.72 Da | 45.18 | 84.88 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF81383 | F-box domain | 194 | 239 | 4.41E-6 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 243 | 309 | 2.12E-7 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 229 | 353 | 1.3E-12 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 258 | 284 | 0.07 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 285 | 310 | 210.0 | IPR006553 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 189 | 236 | 9.312009 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G26000.1 | Ribonuclease inhibitor. | 0 |
| RefSeq | XP_006652433.1 | F-box protein SKIP14 [Oryza brachyantha] | 0 |
| Q9LU91 | F-box protein SKIP14 OS=Arabidopsis thaliana OX=3702 GN=SKIP14 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0KS24 | F-box domain-containing protein OS=Oryza punctata OX=4537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology