Basic Information
Locus ID:
Oco07G007930
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG07 | 11816046 | 11817765 | - | Oco07G007930 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.17 | 48,668.71 Da | 53.02 | 93.06 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 46 | 83 | 1.0E-6 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 275 | 360 | 5.69E-8 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 32 | 99 | 4.45E-9 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 176 | 397 | 1.4E-9 | IPR032675 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 41 | 77 | 9.179537 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G78760.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_006653495.2 | MEIOTIC F-BOX protein MOF-like [Oryza brachyantha] | 0 |
| Q7X7A4 | MEIOTIC F-BOX protein MOF OS=Oryza sativa subsp. japonica OX=39947 GN=MOF PE=1 SV=2 | 0 | |
| TrEMBL | A0A6G1BQX3 | F-box domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_002821 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology