Basic Information
Locus ID:
Oco07G006500
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG07 | 10552432 | 10554863 | - | Oco07G006500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.97 | 49,349.74 Da | 48.76 | 97.08 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 24 | 57 | 6.3E-5 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 153 | 370 | 5.23E-6 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 21 | 76 | 7.19E-10 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 20 | 61 | 2.0E-5 | - |
| SMART | SM00256 | fbox_2 | 24 | 63 | 0.0056 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 18 | 68 | 9.047065 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G13985.1 | FBD-associated F-box protein. | 0 |
| RefSeq | XP_052151624.1 | MEIOTIC F-BOX protein MOF-like, partial [Oryza glaberrima] | 0 |
| Q7X7A4 | MEIOTIC F-BOX protein MOF OS=Oryza sativa subsp. japonica OX=39947 GN=MOF PE=1 SV=2 | 0 | |
| TrEMBL | I1PLJ5 | F-box domain-containing protein OS=Oryza glaberrima OX=4538 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology