Basic Information
Locus ID:
Oco07G006480
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
F-box FBD LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG07 | 10513363 | 10527887 | - | Oco07G006480 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.24 | 48,861.04 Da | 53.50 | 88.21 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 22 | 60 | 3.3E-5 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 161 | 388 | 8.37E-10 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 20 | 63 | 4.19E-11 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 147 | 412 | 5.3E-6 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 19 | 77 | 1.0E-5 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 20 | 56 | 8.941087 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G56420.1 | F-box/RNI-like/FBD-like domains-containing protein. | 0 |
| RefSeq | XP_052150835.1 | MEIOTIC F-BOX protein MOF-like [Oryza glaberrima] | 0 |
| Q7X7A4 | MEIOTIC F-BOX protein MOF OS=Oryza sativa subsp. japonica OX=39947 GN=MOF PE=1 SV=2 | 0 | |
| TrEMBL | A0A0E0KQY9 | F-box domain-containing protein OS=Oryza punctata OX=4537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology