Basic Information
Locus ID:
Oco07G006440
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG07 | 10485572 | 10488002 | - | Oco07G006440 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.96 | 83,408.07 Da | 52.38 | 83.82 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 479 | 768 | 6.97877E-89 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 476 | 764 | 2.4E-40 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 453 | 766 | 1.48E-71 | IPR011009 |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 128 | 328 | 2.09E-13 | IPR009091 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 441 | 562 | 4.1E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 563 | 778 | 7.2E-52 | - |
| Gene3D | G3DSA:2.130.10.30 | - | 35 | 355 | 1.1E-11 | IPR009091 |
| SMART | SM00220 | serkin_6 | 473 | 771 | 8.4E-30 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 473 | 770 | 36.400009 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 611 | 623 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 479 | 501 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47850.1 | CRINKLY4 related 4. | 0 |
| RefSeq | XP_040378999.1 | serine/threonine-protein kinase-like protein CCR4 [Oryza brachyantha] | 0 |
| Q9FIJ6 | Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana OX=3702 GN=CCR4 PE=1 SV=1 | 0 | |
| TrEMBL | Q0JD03 | OJ000114_01.11 protein OS=Oryza sativa subsp. japonica OX=39947 GN=OJ000114_01.11 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology