Basic Information
Locus ID:
Oco07G005160
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Alkaline and neutral invertase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG07 | 9219378 | 9222835 | + | Oco07G005160 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.00 | 67,222.28 Da | 52.94 | 83.30 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12899 | Alkaline and neutral invertase | 111 | 552 | 3.7E-213 | IPR024746 |
| SUPERFAMILY | SSF48208 | Six-hairpin glycosidases | 129 | 551 | 7.48E-48 | IPR008928 |
| Gene3D | G3DSA:1.50.10.10 | - | 143 | 545 | 8.0E-11 | IPR012341 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 81 | 108 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G22510.1 | alkaline/neutral invertase. Encodes a chloroplast-targeted alkaline/neutral invertase that is implicated in the development of the photosynthetic apparatus and nitrogen assimilation in seedlings to control the sucrose to hexose ratio. | 0 |
| RefSeq | XP_015635866.1 | neutral/alkaline invertase 3, chloroplastic-like [Oryza sativa Japonica Group] | 0 |
| Q6H6N5 | Neutral/alkaline invertase 3, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=NIN3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6G1BVG4 | Alkaline/neutral invertase OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_011307 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology