Basic Information
Locus ID:
Oco07G003900
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG07 | 7782749 | 7784053 | - | Oco07G003900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.16 | 49,119.01 Da | 53.08 | 75.46 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 25 | 62 | 1.6E-6 | IPR001810 |
| Pfam | PF08268 | F-box associated domain | 254 | 351 | 3.5E-5 | IPR013187 |
| SUPERFAMILY | SSF81383 | F-box domain | 19 | 80 | 2.09E-13 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 21 | 59 | 6.9E-8 | - |
| SMART | SM00256 | fbox_2 | 22 | 63 | 1.2E-6 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 132 | 348 | 5.8E-19 | IPR017451 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13200.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_012700658.1 | putative F-box protein At2g02030 [Setaria italica] | 0 |
| Q9SAF4 | Putative F-box/kelch-repeat protein At1g13200 OS=Arabidopsis thaliana OX=3702 GN=At1g13200 PE=4 SV=1 | 0 | |
| TrEMBL | A0A0D9W452 | F-box domain-containing protein OS=Leersia perrieri OX=77586 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology