Basic Information
Locus ID:
Oco07G003480
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG07 | 7253857 | 7256829 | - | Oco07G003480 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.34 | 58,769.59 Da | 39.40 | 85.56 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 112 | 134 | 0.001672 | - |
| Pfam | PF00069 | Protein kinase domain | 221 | 435 | 1.5E-40 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 210 | 478 | 7.38E-65 | IPR011009 |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 45 | 141 | 4.4E-6 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 298 | 490 | 8.3E-43 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 205 | 297 | 1.0E-22 | - |
| SMART | SM00220 | serkin_6 | 220 | 476 | 5.2E-30 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 220 | 487 | 32.72517 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 342 | 354 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21250.1 | cell wall-associated kinase. cell wall-associated kinase, may function as a signaling receptor of extracellular matrix component such as oligogalacturonides. | 0 |
| RefSeq | XP_052152562.1 | wall-associated receptor kinase 2-like [Oryza glaberrima] | 0 |
| Q39191 | Wall-associated receptor kinase 1 OS=Arabidopsis thaliana OX=3702 GN=WAK1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0D3FUS7 | Protein kinase domain-containing protein OS=Oryza barthii OX=65489 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 3 | AH09.693, BH09.711, CH09.770 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_4AG0320520, gene-QOZ80_4BG0357240 |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.3HG0219240.1, HORVU.MOREX.r3.3HG0219270.1 |
| Poaceae | Oryza coarctata | 1 | Oco07G003480 |
| Poaceae | Oryza sativa | 15 | LOC_Os04g18590.1, LOC_Os04g20680.1, LOC_Os04g29770.1 ... |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0200838 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr0G006600, Chr25G013120, Chr30G012830, Chr30G012870 |
| Poaceae | Thinopyrum elongatum | 2 | Tel3E01G012600, Tel6E01G607000 |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC3AG002230, gene_TRIDC6AG051200 ... |
| Poaceae | Triticum aestivum | 4 | TraesCS3A02G006900.1, TraesCS3D02G003900.1 ... |
| Poaceae | Zoysia japonica | 3 | nbis-gene-44989, nbis-gene-49124, nbis-gene-56965 |
| Poaceae | Zoysia macrostachya | 3 | Zma_g19503, Zma_g19505, Zma_g19511 |