Basic Information
Locus ID:
Oco07G002850
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG07 | 6290208 | 6291011 | - | Oco07G002850 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.56 | 28,266.77 Da | 35.50 | 84.46 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 32 | 128 | 4.1E-17 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 156 | 247 | 1.4E-9 | IPR002902 |
| Gene3D | G3DSA:3.30.430.20 | - | 143 | 248 | 1.1E-17 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 29 | 130 | 2.4E-18 | IPR038408 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 26 | 131 | 17.873823 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 141 | 251 | 15.257765 | IPR002902 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05200.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 25. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_040379544.1 | cysteine-rich receptor-like protein kinase 10 [Oryza brachyantha] | 0 |
| Q9M0X5 | Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana OX=3702 GN=CRK25 PE=3 SV=1 | 0 | |
| TrEMBL | A0A0D9ZIW5 | Gnk2-homologous domain-containing protein OS=Oryza glumipatula OX=40148 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_037812 |
| Poaceae | Oryza coarctata | 2 | Oco07G002850, Oco08G017450 |
| Poaceae | Oryza sativa | 3 | LOC_Os04g25060.1, LOC_Os04g25650.1, LOC_Os04g56430.1 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0703707 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC4AG070520, gene_TRIDC6BG000330 |
| Poaceae | Triticum aestivum | 2 | TraesCS3B02G580400.1, TraesCSU02G066500.1.cds1 |