Basic Information
Locus ID:
Oco07G002170
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the copper topaquinone oxidase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG07 | 4816348 | 4821950 | + | Oco07G002170 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.28 | 83,310.67 Da | 37.65 | 77.46 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01179 | Copper amine oxidase, enzyme domain | 318 | 729 | 6.8E-132 | IPR015798 |
| Pfam | PF02727 | Copper amine oxidase, N2 domain | 83 | 162 | 3.6E-15 | IPR015800 |
| Pfam | PF02728 | Copper amine oxidase, N3 domain | 177 | 276 | 4.6E-23 | IPR015802 |
| SUPERFAMILY | SSF54416 | Amine oxidase N-terminal region | 175 | 284 | 1.05E-31 | IPR016182 |
| SUPERFAMILY | SSF49998 | Amine oxidase catalytic domain | 311 | 734 | 3.27E-147 | IPR036460 |
| SUPERFAMILY | SSF54416 | Amine oxidase N-terminal region | 81 | 174 | 1.6E-17 | IPR016182 |
| Gene3D | G3DSA:3.10.450.40 | - | 69 | 173 | 1.2E-17 | - |
| Gene3D | G3DSA:2.70.98.20 | Copper amine oxidase, catalytic domain | 322 | 738 | 1.4E-154 | IPR036460 |
| Gene3D | G3DSA:3.10.450.40 | - | 178 | 272 | 1.7E-26 | - |
| ProSitePatterns | PS01165 | Copper amine oxidase copper-binding site signature. | 692 | 705 | - | IPR000269 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 70 | 84 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 59 | 84 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
ko00260 (Glycine, serine and threonine metabolism)
map00260 (Glycine, serine and threonine metabolism)
ko00350 (Tyrosine metabolism)
map00350 (Tyrosine metabolism)
ko00360 (Phenylalanine metabolism)
map00360 (Phenylalanine metabolism)
ko00410 (beta-Alanine metabolism)
map00410 (beta-Alanine metabolism)
ko00950 (Isoquinoline alkaloid biosynthesis)
map00950 (Isoquinoline alkaloid biosynthesis)
ko00960 (Tropane, piperidine and pyridine alkaloid biosynthesis)
map00960 (Tropane, piperidine and pyridine alkaloid biosynthesis)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko01110 (Biosynthesis of secondary metabolites)
map01110 (Biosynthesis of secondary metabolites)
Reaction:
R02382 (Tyramine + H2O + Oxygen <=> 4-Hydroxyphenylacetaldehyde + Ammonia + Hydrogen peroxide)
R02529 (Aminoacetone + H2O + Oxygen <=> Methylglyoxal + Ammonia + Hydrogen peroxide)
R02613 (Phenethylamine + Oxygen + H2O <=> Phenylacetaldehyde + Ammonia + Hydrogen peroxide)
R03139 (1,3-Diaminopropane + Oxygen + H2O <=> 3-Aminopropanal + Ammonia + Hydrogen peroxide)
R04027 (N-Methylputrescine + Oxygen + H+ <=> 1-Methylpyrrolinium + Hydrogen peroxide + Ammonia)
R04300 (Dopamine + H2O + Oxygen <=> 3,4-Dihydroxyphenylacetaldehyde + Ammonia + Hydrogen peroxide)
R06154 (Methylamine + Oxygen + H2O <=> Formaldehyde + Ammonia + Hydrogen peroxide)
R06740 (Cadaverine + H2O + Oxygen <=> 5-Aminopentanal + Ammonia + Hydrogen peroxide)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G12290.1 | Copper amine oxidase family protein. | 0 |
| RefSeq | XP_052152965.1 | amine oxidase [copper-containing] gamma 2-like [Oryza glaberrima] | 0 |
| Q9M2B9 | Amine oxidase [copper-containing] gamma 2 OS=Arabidopsis thaliana OX=3702 GN=CuAOgamma2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0D3FTJ8 | Amine oxidase OS=Oryza barthii OX=65489 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology