Basic Information
Locus ID:
Oco07G002090
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG07 | 4537796 | 4539346 | + | Oco07G002090 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.64 | 50,325.13 Da | 58.84 | 87.16 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 7 | 47 | 4.5E-7 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 7 | 43 | 6.54E-10 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 6 | 47 | 2.7E-6 | - |
| SMART | SM00256 | fbox_2 | 11 | 51 | 0.0016 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 5 | 42 | 9.576953 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G38390.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_052137099.1 | LOW QUALITY PROTEIN: putative F-box/LRR-repeat protein At1g56400 [Oryza glaberrima] | 0 |
| Q9FF23 | Putative F-box protein At5g38390 OS=Arabidopsis thaliana OX=3702 GN=At5g38390 PE=4 SV=1 | 0 | |
| TrEMBL | A0A8T0SZ27 | F-box domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_5KG588400 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology