Basic Information
Locus ID:
Oco06G029540
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG06 | 31035563 | 31040088 | - | Oco06G029540 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.24 | 97,740.48 Da | 44.87 | 78.16 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00293 | USP_Like | 61 | 188 | 1.94182E-10 | - |
| Pfam | PF00069 | Protein kinase domain | 562 | 769 | 1.7E-42 | IPR000719 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 60 | 188 | 5.44E-5 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 540 | 842 | 4.1E-70 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 531 | 633 | 3.9E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 634 | 847 | 3.2E-56 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 59 | 190 | 2.9E-5 | IPR014729 |
| SMART | SM00220 | serkin_6 | 559 | 808 | 7.3E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 559 | 837 | 34.70393 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 565 | 587 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 681 | 693 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 279 | 308 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 258 | 276 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 419 | 438 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 241 | 309 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 241 | 255 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 325 | 339 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 325 | 344 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G77280.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_006652004.2 | serine/threonine-protein kinase pakF-like [Oryza brachyantha] | 0 |
| B5X4Z9 | Protein kinase STUNTED OS=Arabidopsis thaliana OX=3702 GN=STU PE=2 SV=1 | 0 | |
| TrEMBL | A0A6G1DIX2 | Protein kinase domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_014023 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_03.2862.V1.1 |
| Poaceae | Echinochloa crus-galli | 3 | AH01.522, BH01.211, CH01.54 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_3AG0208960, gene-QOZ80_3BG0254090 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.5HG0531390.1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_060288, gene-QYE76_060318 |
| Poaceae | Oryza coarctata | 2 | Oco05G028500, Oco06G029540 |
| Poaceae | Oryza sativa | 1 | LOC_Os03g62340.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_01G016700 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0106193 |
| Poaceae | Sporobolus alterniflorus | 5 | Chr01G000760, Chr04G032270, Chr07G031320, Chr12G032230 ... |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G807200 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC4AG052760, gene_TRIDC5BG077700 |
| Poaceae | Triticum aestivum | 3 | TraesCS4A02G351900.1, TraesCS5B02G521500.1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb063970_P001, Zm00001eb211040_P001 |
| Poaceae | Zoysia japonica | 3 | nbis-gene-15618, nbis-gene-16707, nbis-gene-56167 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g2405, Zma_g83 |