Basic Information
Locus ID:
Oco06G029260
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Translocase of chloroplast 159/132, membrane anchor domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG06 | 30844517 | 30849561 | + | Oco06G029260 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.80 | 129,354.87 Da | 46.65 | 79.10 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 907 | 1169 | 2.7E-99 | IPR024283 |
| Pfam | PF04548 | AIG1 family | 557 | 689 | 1.9E-19 | IPR006703 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 548 | 682 | 8.89E-18 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 526 | 771 | 4.2E-53 | IPR027417 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 456 | 1178 | 1.9E-265 | IPR005690 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 554 | 769 | 25.112167 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 48 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 17 | 37 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 256 | 277 | - | - |
| Coils | Coil | Coil | 861 | 888 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02510.1 | translocon at the outer envelope membrane of chloroplasts 159. An integral membrane GTPase that functions as a transit-sequence receptor required for the import of proteins necessary for chloroplast biogenesis. Located in the outer chloroplast membrane. Phosphorylation of the G-domains regulate translocon assembly. | 0 |
| RefSeq | XP_040377602.1 | translocase of chloroplast 101, chloroplastic-like [Oryza brachyantha] | 0 |
| O81283 | Translocase of chloroplast 159, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC159 PE=1 SV=1 | 0 | |
| TrEMBL | J3LUI9 | AIG1-type G domain-containing protein OS=Oryza brachyantha OX=4533 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology