Basic Information
Locus ID:
Oco06G026560
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Plastocyanin-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG06 | 28951039 | 28951775 | - | Oco06G026560 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.12 | 17,563.97 Da | 38.76 | 77.77 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04216 | Phytocyanin | 26 | 123 | 1.33212E-49 | - |
| Pfam | PF02298 | Plastocyanin-like domain | 40 | 116 | 1.1E-23 | IPR003245 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 25 | 124 | 1.55E-32 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 24 | 128 | 7.5E-35 | IPR008972 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 26 | 125 | 37.149937 | IPR003245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 126 | 145 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_040377544.1 | blue copper protein 1a-like [Oryza brachyantha] | 0 |
| G7L0H3 | Blue copper protein 1a OS=Medicago truncatula OX=3880 GN=MTR_7g086140 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6G1DT66 | Phytocyanin domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_036764 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology