Basic Information
Locus ID:
Oco06G025730
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG06 | 28277624 | 28282200 | - | Oco06G025730 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.26 | 82,823.49 Da | 46.88 | 92.12 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 403 | 547 | 1.3E-15 | IPR001245 |
| Pfam | PF00560 | Leucine Rich Repeat | 155 | 173 | 0.62 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 378 | 673 | 8.4E-39 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 53 | 250 | 1.13E-22 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 361 | 469 | 4.7E-16 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 279 | 2.6E-30 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 470 | 698 | 8.5E-30 | - |
| SMART | SM00220 | serkin_6 | 397 | 678 | 2.4E-6 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 155 | 177 | 7.157505 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 397 | 678 | 18.789045 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 720 | 765 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16250.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_006651859.3 | probable LRR receptor-like serine/threonine-protein kinase At2g16250 [Oryza brachyantha] | 0 |
| C0LGK4 | Probable LRR receptor-like serine/threonine-protein kinase At2g16250 OS=Arabidopsis thaliana OX=3702 GN=At2g16250 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0KJK3 | Protein kinase domain-containing protein OS=Oryza punctata OX=4537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology