Basic Information
Locus ID:
Oco06G024850
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG06 | 27483596 | 27488925 | - | Oco06G024850 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.81 | 113,062.01 Da | 44.35 | 104.63 | 0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 773 | 1041 | 5.69876E-90 | - |
| Pfam | PF13855 | Leucine rich repeat | 536 | 594 | 7.3E-10 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 243 | 265 | 0.44 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 770 | 967 | 1.1E-41 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 69 | 1.1E-4 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 146 | 204 | 2.1E-9 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 745 | 1038 | 7.96E-74 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 90 | 629 | 5.1E-60 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 186 | 5.9E-36 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 280 | 400 | 3.0E-22 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 187 | 279 | 4.1E-25 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 843 | 1044 | 1.2E-55 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 401 | 677 | 5.6E-44 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 728 | 842 | 1.1E-26 | - |
| SMART | SM00369 | LRR_typ_2 | 557 | 581 | 28.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 241 | 264 | 27.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 533 | 556 | 380.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 767 | 1019 | 1.9E-31 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 123 | 146 | 29.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 605 | 629 | 64.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 169 | 192 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 193 | 217 | 20.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 767 | 1041 | 38.378769 | IPR000719 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 23 | 6.0 | - |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 773 | 795 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 887 | 899 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 244 | 257 | 7.8E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 581 | 594 | 7.8E-6 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.2 | - | 0 |
| RefSeq | XP_006650609.1 | LRR receptor-like serine/threonine-protein kinase RPK2 [Oryza brachyantha] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8J5WYX7 | Protein kinase domain-containing protein OS=Zizania palustris OX=103762 GN=GUJ93_ZPchr0013g37513 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology