Basic Information
Locus ID:
Oco06G024620
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG06 | 27256398 | 27265206 | + | Oco06G024620 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.25 | 144,497.31 Da | 46.51 | 85.02 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00225 | Kinesin motor domain | 38 | 369 | 3.6E-112 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 32 | 403 | 1.45E-118 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 26 | 381 | 2.4E-136 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 30 | 377 | 2.1E-161 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 32 | 369 | 122.520401 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 265 | 276 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 233 | 250 | 2.4E-41 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 104 | 125 | 2.4E-41 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 266 | 284 | 2.4E-41 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 319 | 340 | 2.4E-41 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
| Coils | Coil | Coil | 1198 | 1225 | - | - |
| Coils | Coil | Coil | 831 | 858 | - | - |
| Coils | Coil | Coil | 614 | 662 | - | - |
| Coils | Coil | Coil | 731 | 751 | - | - |
| Coils | Coil | Coil | 1090 | 1124 | - | - |
| Coils | Coil | Coil | 1044 | 1064 | - | - |
| Coils | Coil | Coil | 959 | 979 | - | - |
| Coils | Coil | Coil | 390 | 410 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G44050.1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 0 |
| RefSeq | XP_015690068.2 | kinesin-like protein KIN-12G [Oryza brachyantha] | 0 |
| Q75LL2 | Kinesin-like protein KIN-12G OS=Oryza sativa subsp. japonica OX=39947 GN=KIN12G PE=3 SV=1 | 0 | |
| TrEMBL | A0A6G1DRM5 | Kinesin motor domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_034082 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology