Basic Information
Locus ID:
Oco06G022650
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG06 | 25371841 | 25375791 | - | Oco06G022650 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.43 | 100,678.47 Da | 33.97 | 89.68 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 594 | 866 | 1.86347E-94 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 327 | 360 | 0.0056 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 19 | 57 | 0.019 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 591 | 822 | 1.0E-47 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 56 | 430 | 4.08E-47 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 565 | 875 | 1.82E-79 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 549 | 664 | 3.8E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 18 | 319 | 6.1E-77 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 666 | 884 | 1.7E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 323 | 448 | 2.2E-30 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 253 | 277 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 130 | 155 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 409 | 433 | 54.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 106 | 129 | 9.7E-4 | IPR003591 |
| SMART | SM00220 | serkin_6 | 588 | 874 | 2.6E-46 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 180 | 204 | 180.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 588 | 869 | 40.258591 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 713 | 725 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 594 | 616 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 921 | 943 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 452 | 474 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 450 | 474 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_052147977.1 | receptor protein kinase TMK1-like [Oryza glaberrima] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0KI93 | Protein kinase domain-containing protein OS=Oryza punctata OX=4537 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology