Basic Information
Locus ID:
Oco06G020830
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Calcium-dependent channel, 7TM region, putative phosphate
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG06 | 23340549 | 23348966 | + | Oco06G020830 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.13 | 88,035.66 Da | 41.20 | 103.07 | 0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02714 | Calcium-dependent channel, 7TM region, putative phosphate | 355 | 621 | 8.0E-75 | IPR003864 |
| Pfam | PF13967 | Late exocytosis, associated with Golgi transport | 6 | 163 | 2.8E-35 | IPR032880 |
| Pfam | PF14703 | Cytosolic domain of 10TM putative phosphate transporter | 186 | 344 | 1.8E-24 | IPR027815 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 715 | 734 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 705 | 737 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 759 | 778 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G58520.1 | lipases;hydrolases, acting on ester bonds. | 0 |
| RefSeq | XP_006650399.1 | CSC1-like protein RXW8 isoform X1 [Oryza brachyantha] | 0 |
| F4IBD7 | CSC1-like protein RXW8 OS=Arabidopsis thaliana OX=3702 GN=RXW8 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6G1DB79 | CSC1-like protein RXW8 OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_001229 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology